Lecture: Dynamical Systems in Biology  From Mathematical Biology to Systems Biology (Advanced Theory)
The lecture is suitable for mathematically interested students of biology and medicine, and also for bachelor students of physics
Time: Monday 1214, Wednesday 1214
Location: SR I
Computer exercises: Wednesday 1416, CIP Pool
If you do not have an account for the CIPpool, please, get one
here
Start: April 24, 2019
Previous knowledge: Classical mechanics, differential equations
Literature:
 J.D. Murray: Mathematical Biology
 J. Keener, J. Sneyd: Mathematical Physiology
 L. Alberhina, H.V. Westerhoff: Systems Biology
 E. Klipp et al.: Systems Biology in Practice
The physically motivated mathematical modelling of the dynamics of
biological systems provides a mean to turn the typically rather
qualitative field of biology quantitative and predictive.
While the well established area of
Mathematical Biology investigates simple systems, the young field
of Systems Biology considers the behavior of complex networks.
In this lecture, we will discuss the biological basics of selected
models and their mathematical and physical properties.
News:

Concerning the exercises, message from Daniel:
 ]add ForwardDiff
 ]add ReverseDiff
 using ForwardDiff, ReverseDiff
 The second hour of the lecture on Wednesday, July 17, we will have
a question time ''What you ever wanted to ask about dynamical
systems in biology but never dared to ask''
 The written exam will take place Monday, July 22, 12:15 in SR I
 Prüfungsleistung: The mark of the written exam, Studienleistung: Pass the written exam
 The guided tour through our cathedral (in German, sorry, ... still thinking about, probably in English ...) will take place Wednesday,
July 24, 12:15. Meeting place: Historisches Kaufhaus
Preliminary Programme
 Mathematical Biology
 Populationdynamics
 Models of neurons
 Pattern formation
 Enzym dynamics
 Systems Biology
 Metabolic Networks
 Signal transduction cascades
 Gene regulation
The
lecture notes are up to date for the next lecture at midnight the day
before
The exercises:
Exercises